| Bioproject |
Description |
Publication |
GVCF File |
Library Num. |
| PRJEB40186 |
Whole genome sequencing of Tectona grandis L. in Thailand |
- |
 |
|
| Library |
Title |
Platform |
Total Base |
VCF File |
| ERR4560654 |
WGS of Tectona grandis: plant from Thailand; SAMEA7287920 |
ILLUMINA |
6278059270 bp |
|
| ERR4560655 |
WGS of Tectona grandis: plant from Thailand; SAMEA7287918 |
ILLUMINA |
9000416140 bp |
|
| ERR4560728 |
WGS of Tectona grandis: plant from Thailand; TecgraTh04 |
ILLUMINA |
9813799482 bp |
|
| ERR4565918 |
WGS of Tectona grandis: plant from Thailand; TecgraTh05 |
ILLUMINA |
14017113352 bp |
|
| ERR4566020 |
WGS of Tectona grandis: plant from Thailand; TecgraTh06 |
ILLUMINA |
10744531364 bp |
|
| ERR4566038 |
WGS of Tectona grandis: plant from Thailand; SAMEA7287924 |
ILLUMINA |
8743111026 bp |
|
| ERR4566103 |
WGS of Tectona grandis: plant from Thailand; SAMEA7287925 |
ILLUMINA |
9357804238 bp |
|
| ERR4566280 |
WGS of Tectona grandis: plant from Thailand; SAMEA7287926 |
ILLUMINA |
9704762182 bp |
|
| ERR4566281 |
WGS of Tectona grandis: plant from Thailand; SAMEA7287927 |
ILLUMINA |
8575269996 bp |
|
| ERR4566300 |
WGS of Tectona grandis: plant from Thailand; SAMEA7287928 |
ILLUMINA |
14016760510 bp |
|
| ERR4566400 |
WGS of Tectona grandis: plant from Thailand; SAMEA7287929 |
ILLUMINA |
11972960790 bp |
|
| ERR4566419 |
WGS of Tectona grandis: plant from Thailand; SAMEA7287930 |
ILLUMINA |
10223619004 bp |
|
| ERR4566420 |
WGS of Tectona grandis: plant from Thailand; SAMEA7287931 |
ILLUMINA |
10516812776 bp |
|
| ERR4566905 |
WGS of Tectona grandis: plant from Thailand; SAMEA7287918 |
ILLUMINA |
5953137588 bp |
|
| ERR4567089 |
WGS of Tectona grandis: plant from Thailand; SAMEA7287918 |
ILLUMINA |
7453869728 bp |
|
| ERR4567090 |
WGS of Tectona grandis: plant from Thailand; SAMEA7287918 |
ILLUMINA |
7939514542 bp |
|
| ERR7300224 |
WGS of Tectona grandis: plant from Thailand; SAMEA7287919 |
ILLUMINA |
13934841808 bp |
|
|
| PRJNA359989 |
Sequencing of plant species from the Lamiales |
Lichman et al., 2019 |
|
|
| Library |
Title |
Platform |
Total Base |
VCF File |
| SRR6940065 |
WGS of Tectona grandis: plant with leaf from USA; Leaf of Tectona grandis |
ILLUMINA |
7258301400 bp |
|
| SRR6940066 |
WGS of Tectona grandis: plant with leaf from USA; Leaf of Tectona grandis |
ILLUMINA |
7302351000 bp |
|
|
| PRJNA374940 |
Whole genome sequencing of Tectona grandis |
Yasodha et al., 2018 |
|
|
| Library |
Title |
Platform |
Total Base |
VCF File |
| SRR5265130 |
WGS of Tectona grandis: plant with leaf from India; ; TG_51 |
ILLUMINA |
41443978232 bp |
|
|
| PRJNA421422 |
Development of Polymorphic SSR Markers Based on Whole Genome Resequencing of 5 teak individuals |
Yasodha et al., 2018 |
|
|
| Library |
Title |
Platform |
Total Base |
VCF File |
| SRR6360541 |
WGS of Tectona grandis: Clone plant with leaf from India:Kerala; Teak; Individual 3 (WR) |
ILLUMINA |
8522327354 bp |
|
| SRR6360542 |
WGS of Tectona grandis: Clone plant with leaf from India:Kerala; Teak; Individual 1 (NR) |
ILLUMINA |
6795972440 bp |
|
| SRR6360543 |
WGS of Tectona grandis: Seedling plant with leaf from India:Assam; Teak; Individual 5 (HI) |
ILLUMINA |
5142877592 bp |
|
| SRR6360544 |
WGS of Tectona grandis: Seedling plant with leaf from India:Karnataka; Teak; Individual 4 (DI) |
ILLUMINA |
5940535998 bp |
|
| SRR6360545 |
WGS of Tectona grandis: Clone plant with leaf from India:Tamilnadu; Teak; Individual 6 (TP) |
ILLUMINA |
5689096536 bp |
|
|
| PRJNA438407 |
High-depth whole genome sequencing of 760 vascular plants with specimens and images available Raw sequence reads |
Liu et al., 2019 |
|
|
| Library |
Title |
Platform |
Total Base |
VCF File |
| SRR7121481 |
WGS of Tectona grandis: plant with leaves from China:yunnan; RL0098 |
BGISEQ |
76603532000 bp |
|
|
| PRJNA493753 |
Whole genome sequencing of Tectona grandis |
Zhao et al., 2019 |
|
|
| Library |
Title |
Platform |
Total Base |
VCF File |
| SRR7984123 |
WGS of Tectona grandis: Seedling\, young less than one year old plant with leaf from USA; ; teak_PacBio_RSII dataset 3 |
PACBIO_SMRT |
1320423388 bp |
|
| SRR7984124 |
WGS of Tectona grandis: Seedling\, young less than one year old plant with leaf from USA; ; teak_PacBio_RSII dataset 4 |
PACBIO_SMRT |
3013636532 bp |
|
| SRR7984125 |
WGS of Tectona grandis: Seedling\, young less than one year old plant with leaf from USA; ; teak_PacBio_Sequel |
PACBIO_SMRT |
25169337086 bp |
|
| SRR7984126 |
WGS of Tectona grandis: Seedling\, young less than one year old plant with leaf from USA; ; teak_PacBio_RSII dataset 2 |
PACBIO_SMRT |
1168678495 bp |
|
| SRR7984127 |
WGS of Tectona grandis: Seedling\, young less than one year old plant with leaf from USA; ; teak_TruSeq |
ILLUMINA |
53543121900 bp |
|
| SRR7984128 |
WGS of Tectona grandis: Seedling\, young less than one year old plant with leaf from USA; ; teak_PacBio_RSII dataset 1 |
PACBIO_SMRT |
3262004051 bp |
|
| SRR7984129 |
WGS of Tectona grandis: Seedling\, young less than one year old plant with leaf from USA; ; TEC_AA |
ILLUMINA |
114552429000 bp |
|
| SRR7984130 |
WGS of Tectona grandis: Seedling\, young less than one year old plant with leaf from USA; ; TEC_AB |
ILLUMINA |
25851949800 bp |
|
|
| PRJNA981223 |
Tectona grandis Raw sequence reads |
- |
|
|
| Library |
Title |
Platform |
Total Base |
VCF File |
| SRR24874930 |
WGS of Tectona grandis: clonal tree (sapling) with leaf tissue from Costa Rica: Santa Clara; wHADPI027392-90 |
ILLUMINA |
11453396100 bp |
|
| SRR24875763 |
WGS of Tectona grandis: clonal tree (sapling) with leaf tissue from Costa Rica: Santa Clara; wHADPI027394-92 |
ILLUMINA |
14913345600 bp |
|
| SRR24877673 |
WGS of Tectona grandis: clonal tree (sapling) with leaf tissue from Costa Rica: Santa Clara; wHAIPI027393-58 |
ILLUMINA |
16179338250 bp |
|
| SRR24878941 |
WGS of Tectona grandis: clonal tree (sapling) with leaf tissue from Costa Rica: Santa Clara; wHAIPI027395-59 |
ILLUMINA |
16675255500 bp |
|
|
Species Info.
Omics Data
Seq. Analysis
Project
17